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@SteveBellovin @blakereid @mattblaze @paulgowder
That's one of the reasons that splitting a document into multiple files works better (they all appear as one workspace with links on the side to click on specific files). When you use pandoc and combine the documents, all of the footnotes are renumbered appropriately and appear as they normally would.
On the upside for Markdown, auto-completion, brought from the coding world, makes using Zotero even easier. 2/